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  5. Pnu_g25841

Pnu_g25841


Description : not classified & original description: none


Gene families : OG0001678 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001678_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25841
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G16880 No alias uridylyltransferase-related 0.03 OrthoFinder output from all 47 species
Aop_g09514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G045200.1 Ceric.15G045200 not classified & original description: pacid=50639664... 0.04 OrthoFinder output from all 47 species
Dcu_g00676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_853979g0010 No alias ACT domain-containing protein ACR11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g03938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012820_P001 Zm00001e012820 ACT domain-containing protein DS12, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!