MA_92651g0010


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation. auxin response factor 2 (ARF2)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_92651g0010
Cluster HCCA cluster: Cluster_374

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008639001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
GSVIVT01035204001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os08g40900 Os08g0520500,... 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os12g29520 Os12g0479400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Smo424114 PACid_15422082 No description available 0.01 Gene family
Solyc00g188857.1.1 Solyc00g188857.1 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d001879 GRMZM2G078274 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d036593 GRMZM2G089640 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 222 323
IPR010525 Auxin_resp 348 430
IPR033389 AUX/IAA_dom 810 918
No external refs found!