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  5. Pnu_g25670

Pnu_g25670


Description : regulatory protein *(BDR) involved in RNA polymerase-II transcription & original description: none


Gene families : OG0002847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25670

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0005.g008940 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.02 OrthoFinder output from all 47 species
Gb_22043 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g11236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g01870.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g11843 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.04 OrthoFinder output from all 47 species
Zm00001e024973_P001 Zm00001e024973 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR012921 SPOC_C 535 681
IPR003618 TFIIS_cen_dom 228 309
No external refs found!