MA_92522g0010


Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo. MONOPOLE (MNP)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_92522g0010
Cluster HCCA cluster: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018833001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
GSVIVT01018951001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
GSVIVT01024194001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
GSVIVT01033385001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os01g47360 Os01g0662800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
LOC_Os05g50270 Os05g0578900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc02g085190.2.1 Solyc02g085190.2 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Solyc03g033660.3.1 Solyc03g033660.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Solyc04g015360.3.1 Solyc04g015360.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d009193 GRMZM2G104390 No description available 0.02 Gene family
Zm00001d009668 GRMZM2G397616 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.06 Gene family
Zm00001d017409 GRMZM2G140669 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d039113 GRMZM2G325850 No description available 0.04 Gene family
Zm00001d043969 GRMZM2G123909 No description available 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 235 269
No external refs found!