Pnu_g25600 (emb2738)

Aliases : emb2738

Description : not classified & original description: none

Gene families : OG0006217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006217_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g25600
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
Aop_g64838	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G078300.1	emb2738, Ceric.03G078300	not classified & original description: pacid=50572633...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020780.28	emb2738	No description available	0.01	OrthoFinder output from all 47 species
GSVIVT01025275001	emb2738	No description available	0.02	OrthoFinder output from all 47 species
LOC_Os11g41910.1	emb2738, LOC_Os11g41910	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp3g03840.1	emb2738	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g01060	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g48494	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50694	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16041	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011327_P001	emb2738, Zm00001e011327	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032859	KH_dom-like	559	640
IPR006073	GTP-bd	176	317
IPR006073	GTP-bd	379	500

External Links

No external refs found!