Gb_34245


Description : Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana (sp|q9sa60|ppr6_arath : 366.0)


Gene families : OG_01_0001060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001060_tree ,
OG_02_0001470 (LandPlants) Phylogenetic Tree(s): OG_02_0001470_tree ,
OG_03_0003417 (SeedPlants) Phylogenetic Tree(s): OG_03_0003417_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34245
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT1G69290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
Solyc01g088750.3.1 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.05 Archaeplastida
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.04 Archaeplastida
Zm00001e019596_P001 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.05 Archaeplastida
AMTR_s00002p00179800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g17616... 0.02 LandPlants
AT1G68980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
AT1G69290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 LandPlants
Solyc01g088750.3.1 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.05 LandPlants
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 LandPlants
Zm00001e019596_P001 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 LandPlants
AT1G03100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 SeedPlants
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 601 648
IPR002885 Pentatricopeptide_repeat 295 320
IPR002885 Pentatricopeptide_repeat 499 527
No external refs found!