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  5. Pnu_g25448

Pnu_g25448


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25448
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.05 OrthoFinder output from all 47 species
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
AT1G43000 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g050234 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13991.t1 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13991.t2 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34065.t1 Aspi01Gene34065 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030564 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0246.g060041 No alias PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0314.g064258 No alias PLATZ-type transcription factor & original description: CDS=1-804 0.02 OrthoFinder output from all 47 species
Ceric.01G009800.1 Ceric.01G009800 PLATZ-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.02G063700.1 Ceric.02G063700 PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.06G070000.1 Ceric.06G070000 PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.24G040000.1 Ceric.24G040000 PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G029500.1 Ceric.39G029500 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Gb_32018 No alias transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Gb_40617 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os01g33370.1 LOC_Os01g33370 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09070.1 LOC_Os02g09070 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os02g46610.1 LOC_Os02g46610 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g02790.1 LOC_Os09g02790 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g03080.1 LOC_Os09g03080 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42410.3 LOC_Os10g42410 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Len_g20027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06481 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16678 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10310g0010 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
MA_12209g0020 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Ore_g35505 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07660 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10046 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27974 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32497 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025441 No alias not classified & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Sam_g26119 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g033110.3.1 Solyc02g033110 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc02g036130.3.1 Solyc02g036130 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Solyc07g049130.1.1 Solyc07g049130 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Spa_g29503 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002426_P001 Zm00001e002426 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e023175_P001 Zm00001e023175 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 67 138
No external refs found!