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  5. Pnu_g25365

Pnu_g25365


Description : Vicilin class-I seed storage protein *(PAP85) & original description: none


Gene families : OG0003057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25365
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00089270 evm_27.TU.AmTr_v1... Vicilin-like seed storage protein At2g18540... 0.06 OrthoFinder output from all 47 species
AT2G28490 No alias RmlC-like cupins superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G36700 No alias RmlC-like cupins superfamily protein 0.07 OrthoFinder output from all 47 species
Ala_g09961 No alias Vicilin class-I seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29263 No alias Vicilin class-I seed storage protein & original description: none 0.09 OrthoFinder output from all 47 species
Azfi_s0054.g033814 No alias not classified & original description: CDS=76-1581 0.08 OrthoFinder output from all 47 species
Azfi_s0136.g050973 No alias Vicilin class-I seed storage protein & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0230.g059179 No alias Vicilin class-I seed storage protein & original... 0.06 OrthoFinder output from all 47 species
Ceric.02G054400.1 Ceric.02G054400 Vicilin class-I seed storage protein & original... 0.06 OrthoFinder output from all 47 species
Ceric.35G046100.1 Ceric.35G046100 Vicilin class-I seed storage protein & original... 0.04 OrthoFinder output from all 47 species
Ceric.36G056200.1 Ceric.36G056200 not classified & original description: pacid=50567943... 0.05 OrthoFinder output from all 47 species
Ceric.37G066000.1 Ceric.37G066000 Vicilin class-I seed storage protein & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019005001 No alias Vicilin-like seed storage protein At2g18540... 0.08 OrthoFinder output from all 47 species
GSVIVT01025139001 No alias Vicilin-like seed storage protein At2g28490... 0.06 OrthoFinder output from all 47 species
Gb_30035 No alias Vicilin-like seed storage protein At2g18540... 0.05 OrthoFinder output from all 47 species
LOC_Os03g10110.1 LOC_Os03g10110 Vicilin-like seed storage protein At4g36700... 0.08 OrthoFinder output from all 47 species
LOC_Os03g21790.1 LOC_Os03g21790 Vicilin-like seed storage protein At2g28490... 0.03 OrthoFinder output from all 47 species
Len_g58665 No alias Vicilin class-I seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17726 No alias Vicilin class-I seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38194 No alias Vicilin class-I seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
MA_489993g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7115598g0010 No alias Vicilin-like seed storage protein At2g28490... 0.03 OrthoFinder output from all 47 species
MA_8072g0010 No alias Vicilin-like seed storage protein At2g28490... 0.04 OrthoFinder output from all 47 species
Msp_g44318 No alias Vicilin class-I seed storage protein *(PAP85) & original... 0.05 OrthoFinder output from all 47 species
Ore_g16625 No alias Vicilin class-I seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38889 No alias Vicilin class-I seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42319 No alias Vicilin class-I seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14926 No alias Vicilin class-I seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g085590.4.1 Solyc02g085590 Vicilin-like seed storage protein At2g18540... 0.09 OrthoFinder output from all 47 species
Solyc06g075280.3.1 Solyc06g075280 Vicilin-like seed storage protein At2g28490... 0.02 OrthoFinder output from all 47 species
Solyc11g072380.2.1 Solyc11g072380 Vicilin-like seed storage protein At2g28490... 0.08 OrthoFinder output from all 47 species
Zm00001e001586_P001 Zm00001e001586 Vicilin-like seed storage protein At2g28490... 0.05 OrthoFinder output from all 47 species
Zm00001e038790_P005 Zm00001e038790 Vicilin-like seed storage protein At2g18540... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 273 418
IPR006045 Cupin_1 92 219
No external refs found!