AMTR_s00047p00177970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00047.101

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG_01_0000951 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000951_tree ,
OG_02_0000709 (LandPlants) Phylogenetic Tree(s): OG_02_0000709_tree ,
OG_03_0000552 (SeedPlants) Phylogenetic Tree(s): OG_03_0000552_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00177970
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00022060 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 180 223
No external refs found!