Pnu_g25269


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25269

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
AMTR_s00084p00089150 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00072730 MEF21,... Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Adi_g005601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035608 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046905 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056821 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058786 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01931 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22600 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06833 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30199 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55228 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62803 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08381 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31975 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001369 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: CDS=172-2610 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.02 OrthoFinder output from all 47 species
Azfi_s0061.g034904 No alias not classified & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Azfi_s0236.g059498 No alias not classified & original description: CDS=1-2331 0.03 OrthoFinder output from all 47 species
Azfi_s0380.g067373 No alias not classified & original description: CDS=1-3669 0.02 OrthoFinder output from all 47 species
Cba_g19309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29689 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G062600.1 Ceric.21G062600 not classified & original description: pacid=50603664... 0.03 OrthoFinder output from all 47 species
Ceric.27G020400.1 Ceric.27G020400 not classified & original description: pacid=50605502... 0.03 OrthoFinder output from all 47 species
Dac_g07040 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05563 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21829 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20585 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
Gb_06568 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Gb_25046 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g00981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03897 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05665 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06167 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25822 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_10436932g0010 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_34492g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_482767g0010 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41402 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63652 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03469 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03793 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16161 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16162 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16177 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30093 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30095 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33734 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44475 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008284 OTP84 not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10679 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019971_P001 Zm00001e019971 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e034903_P001 SLO1, Zm00001e034903 Pentatricopeptide repeat-containing protein At2g22410,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 7 32
IPR002885 Pentatricopeptide_repeat 344 366
IPR002885 Pentatricopeptide_repeat 111 137
IPR002885 Pentatricopeptide_repeat 35 83
IPR002885 Pentatricopeptide_repeat 167 215
IPR002885 Pentatricopeptide_repeat 268 314
No external refs found!