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  5. Pnu_g24888

Pnu_g24888


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g24888

Target Alias Description ECC score Gene Family Method Actions
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Dcu_g13418 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11508 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g006990.3.1 Solyc04g006990 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc05g009880.3.1 Solyc05g009880 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e004145_P001 Zm00001e004145 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 189 235
No external refs found!