Gb_33603


Description : Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana (sp|q9lpx2|ppr39_arath : 122.0)


Gene families : OG_01_0001265 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001265_tree ,
OG_02_0000728 (LandPlants) Phylogenetic Tree(s): OG_02_0000728_tree ,
OG_03_0004717 (SeedPlants) Phylogenetic Tree(s): OG_03_0004717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33603

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.04 Archaeplastida
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.03 Archaeplastida
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 Archaeplastida
MA_20659g0010 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.2 Archaeplastida
MA_791664g0010 No alias Pentatricopeptide repeat-containing protein At3g56030,... 0.01 Archaeplastida
Smo80491 No alias Pentatricopeptide repeat-containing protein At1g62670,... 0.03 Archaeplastida
Solyc03g095960.1.1 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 Archaeplastida
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.04 LandPlants
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.03 LandPlants
AT1G13040 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 LandPlants
GSVIVT01000559001 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.07 LandPlants
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
MA_20659g0010 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.2 LandPlants
Smo80491 No alias Pentatricopeptide repeat-containing protein At1g62670,... 0.03 LandPlants
Solyc03g095960.1.1 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
Gb_33452 No alias Pentatricopeptide repeat-containing protein At5g14080... 0.04 SeedPlants
LOC_Os03g56960.1 No alias Pentatricopeptide repeat-containing protein At5g14080... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 415
IPR002885 Pentatricopeptide_repeat 427 454
IPR002885 Pentatricopeptide_repeat 317 358
No external refs found!