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  5. Gb_33603

Gb_33603


Description : Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana (sp|q9lpx2|ppr39_arath : 122.0)


Gene families : OG_01_0001265 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001265_tree ,
OG_02_0000728 (LandPlants) Phylogenetic Tree(s): OG_02_0000728_tree ,
OG_03_0004717 (SeedPlants) Phylogenetic Tree(s): OG_03_0004717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33603

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.04 Archaeplastida
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.03 Archaeplastida
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 Archaeplastida
MA_20659g0010 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.2 Archaeplastida
MA_791664g0010 No alias Pentatricopeptide repeat-containing protein At3g56030,... 0.01 Archaeplastida
Smo80491 No alias Pentatricopeptide repeat-containing protein At1g62670,... 0.03 Archaeplastida
Solyc03g095960.1.1 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 Archaeplastida
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.04 LandPlants
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.03 LandPlants
AT1G13040 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 LandPlants
GSVIVT01000559001 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.07 LandPlants
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
MA_20659g0010 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.2 LandPlants
Smo80491 No alias Pentatricopeptide repeat-containing protein At1g62670,... 0.03 LandPlants
Solyc03g095960.1.1 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
Gb_33452 No alias Pentatricopeptide repeat-containing protein At5g14080... 0.04 SeedPlants
LOC_Os03g56960.1 No alias Pentatricopeptide repeat-containing protein At5g14080... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 415
IPR002885 Pentatricopeptide_repeat 427 454
IPR002885 Pentatricopeptide_repeat 317 358
No external refs found!