Gb_33452


Description : Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana (sp|q9fmu2|pp380_arath : 464.0)


Gene families : OG_01_0008070 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008070_tree ,
OG_02_0006659 (LandPlants) Phylogenetic Tree(s): OG_02_0006659_tree ,
OG_03_0004717 (SeedPlants) Phylogenetic Tree(s): OG_03_0004717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33452
Cluster HCCA: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g56960.1 No alias Pentatricopeptide repeat-containing protein At5g14080... 0.03 Archaeplastida
MA_845827g0010 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.03 Archaeplastida
LOC_Os03g56960.1 No alias Pentatricopeptide repeat-containing protein At5g14080... 0.02 LandPlants
MA_845827g0010 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.03 LandPlants
Gb_33603 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.04 SeedPlants
LOC_Os03g56960.1 No alias Pentatricopeptide repeat-containing protein At5g14080... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 423 467
IPR002885 Pentatricopeptide_repeat 493 542
IPR002885 Pentatricopeptide_repeat 216 261
IPR002885 Pentatricopeptide_repeat 103 154
IPR002885 Pentatricopeptide_repeat 182 209
IPR002885 Pentatricopeptide_repeat 384 417
No external refs found!