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Gb_33357


Description : Pentatricopeptide repeat-containing protein At2g40240, mitochondrial OS=Arabidopsis thaliana (sp|q9s733|pp196_arath : 167.0)


Gene families : OG_01_0001265 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001265_tree ,
OG_02_0000728 (LandPlants) Phylogenetic Tree(s): OG_02_0000728_tree ,
OG_03_0001775 (SeedPlants) Phylogenetic Tree(s): OG_03_0001775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33357
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.06 Archaeplastida
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.05 Archaeplastida
AMTR_s00153p00079500 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g56030,... 0.03 Archaeplastida
LOC_Os07g48850.2 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.03 Archaeplastida
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 Archaeplastida
MA_69152g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 Archaeplastida
MA_863891g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g17150.1 No alias Pentatricopeptide repeat-containing protein At1g51965,... 0.02 Archaeplastida
Mp2g13600.1 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.02 Archaeplastida
Zm00001e035905_P001 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.04 Archaeplastida
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.04 LandPlants
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.03 LandPlants
AT1G13040 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 LandPlants
GSVIVT01000559001 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.04 LandPlants
LOC_Os07g48850.2 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.03 LandPlants
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
MA_69152g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 LandPlants
MA_863891g0010 No alias no hits & (original description: none) 0.04 LandPlants
Mp1g17150.1 No alias Pentatricopeptide repeat-containing protein At1g51965,... 0.02 LandPlants
Mp2g13600.1 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.02 LandPlants
Zm00001e035905_P001 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.02 LandPlants
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 428 453
IPR002885 Pentatricopeptide_repeat 250 278
IPR002885 Pentatricopeptide_repeat 390 409
IPR002885 Pentatricopeptide_repeat 291 313
IPR002885 Pentatricopeptide_repeat 315 365
No external refs found!