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  5. Pnu_g24355

Pnu_g24355 (BHLH42, TT8)


Aliases : BHLH42, TT8

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g24355
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Aev_g06112 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03934 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35731 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38152 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05305.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G040400.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01027162001 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027412001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_17737 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_32265 BHLH42, TT8 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47040.1 EGL1, EGL3,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42430.1 ATMYC2, MYC2,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_15962g0010 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_5838g0020 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Nbi_g42483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021673 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-3147 0.04 OrthoFinder output from all 47 species
Solyc01g096370.4.1 Solyc01g096370 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc05g050560.1.1 Solyc05g050560 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc08g083170.1.1 Solyc08g083170 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g37037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP HCCA
MF GO:0061657 UFM1 conjugating enzyme activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 470 516
IPR025610 MYC/MYB_N 18 201
No external refs found!