Pnu_g23977

Description : strigolactone signal modulator *(SMXL) & original description: none

Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g23977

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00222400	evm_27.TU.AmTr_v1...	Phytohormones.strigolactone.perception and signal...	0.02	OrthoFinder output from all 47 species
Ala_g04220	No alias	strigolactone signal modulator *(SMXL) & original...	0.02	OrthoFinder output from all 47 species
MA_10432544g0010	No alias	SMXL strigolactone signal transducer	0.03	OrthoFinder output from all 47 species
Nbi_g06813	No alias	strigolactone signal modulator *(SMXL) & original...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020044	No alias	strigolactone signal modulator *(SMXL) & original...	0.03	OrthoFinder output from all 47 species
Solyc07g006540.3.1	Solyc07g006540	SMXL strigolactone signal transducer	0.02	OrthoFinder output from all 47 species
Zm00001e008174_P001	Zm00001e008174	SMXL strigolactone signal transducer	0.02	OrthoFinder output from all 47 species
Zm00001e022317_P001	Zm00001e022317	SMXL strigolactone signal transducer	0.02	OrthoFinder output from all 47 species
Zm00001e024175_P002	Zm00001e024175	SMXL strigolactone signal transducer	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	842	983
IPR004176	Clp_R_dom	23	54

External Links

No external refs found!