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  5. Pnu_g23944

Pnu_g23944 (TUA6)


Aliases : TUA6

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23944

Target Alias Description ECC score Gene Family Method Actions
Adi_g017320 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aev_g05984 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dde_g35419 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Len_g12228 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g18852 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pp3c9_24320V3.1 TOR2, TUA4, Pp3c9_24320 tubulin alpha-4 chain 0.02 OrthoFinder output from all 47 species
Smo150151 TUA3 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc08g006890.3.1 TUA6, Solyc08g006890 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 4 138
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 188 252
No external refs found!