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Gb_32484


Description : NUP93 scaffold nucleoporin of nuclear pore complex


Gene families : OG_01_0004324 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004324_tree ,
OG_02_0005232 (LandPlants) Phylogenetic Tree(s): OG_02_0005232_tree ,
OG_03_0005542 (SeedPlants) Phylogenetic Tree(s): OG_03_0005542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32484
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00047780 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.05 Archaeplastida
AT2G41620 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.03 Archaeplastida
AT3G57350 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.04 Archaeplastida
Cre17.g717800 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
LOC_Os03g22690.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
MA_10430439g0010 No alias No annotation 0.04 Archaeplastida
MA_10435434g0010 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
MA_10435434g0020 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
MA_273054g0010 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
Mp2g23730.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 Archaeplastida
Pp3c6_19740V3.1 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.04 Archaeplastida
Solyc04g016240.3.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 Archaeplastida
Zm00001e001657_P002 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
AMTR_s00107p00047780 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.05 LandPlants
AT3G57350 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.04 LandPlants
GSVIVT01033240001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 LandPlants
LOC_Os03g22690.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.04 LandPlants
MA_10435434g0020 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.05 LandPlants
Mp2g23730.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 LandPlants
Pp3c6_19740V3.1 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.04 LandPlants
Solyc04g016240.3.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 LandPlants
AMTR_s00107p00047780 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.05 SeedPlants
AT3G57350 No alias Nucleoporin interacting component (Nup93/Nic96-like)... 0.04 SeedPlants
GSVIVT01033240001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 SeedPlants
LOC_Os03g22690.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.04 SeedPlants
MA_10435434g0020 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.05 SeedPlants
Solyc04g016240.3.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.07 SeedPlants
Zm00001e001657_P002 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007231 Nucleoporin_int_Nup93/Nic96 247 826
No external refs found!