Gb_32404


Description : transcription factor (ARF)


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0000395 (LandPlants) Phylogenetic Tree(s): OG_02_0000395_tree ,
OG_03_0002431 (SeedPlants) Phylogenetic Tree(s): OG_03_0002431_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32404
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003591001 No alias No description available 0.03 Archaeplastida
GSVIVT01020805001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01021553001 No alias RNA biosynthesis.transcriptional activation.B3... 0.05 Archaeplastida
GSVIVT01025159001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01025691001 No alias RNA biosynthesis.transcriptional activation.B3... 0.06 Archaeplastida
Mp1g12750.1 No alias transcription factor (ARF) 0.01 Archaeplastida
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Solyc05g047460.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc09g007810.4.1 No alias transcription factor (ARF) 0.05 Archaeplastida
Solyc10g086130.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
GSVIVT01025159001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 LandPlants
MA_10431460g0020 No alias transcription factor (ARF) 0.05 LandPlants
MA_10432349g0010 No alias transcription factor (ARF) 0.02 LandPlants
GSVIVT01025159001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 SeedPlants
MA_10431460g0020 No alias transcription factor (ARF) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 188 289
IPR033389 AUX/IAA_dom 794 893
IPR010525 Auxin_resp 314 396
No external refs found!