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  5. Pnu_g23614

Pnu_g23614 (ATRHM3, RHM3)


Aliases : ATRHM3, RHM3

Description : UDP-L-rhamnose synthase *(RHM) & original description: none


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23614

Target Alias Description ECC score Gene Family Method Actions
Aev_g03858 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13357 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29693 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03477 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18978 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18471.t1 RHM1, ROL1,... UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G016100.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001278.3 ATRHM2, RHM2,... Trifunctional UDP-glucose... 0.01 OrthoFinder output from all 47 species
GSVIVT01014091001 ATRHM3, RHM3 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Gb_18288 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
LOC_Os03g17000.2 RHM1, ROL1,... UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Len_g10909 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431083g0010 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
MA_217856g0010 NRS/ER, UER1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
MA_35415g0010 ATRHM3, RHM3 Trifunctional UDP-glucose... 0.02 OrthoFinder output from all 47 species
Ore_g30896 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12559 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07572 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50767 No alias UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05877 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24187 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015435_P001 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species
Zm00001e025412_P001 ATRHM2, RHM2,... Trifunctional UDP-glucose... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 12 317
IPR029903 RmlD-like-bd 389 562
No external refs found!