1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g23609

Pnu_g23609 (PLA IIB, PLP6)


Aliases : PLA IIB, PLP6

Description : phospholipase-A2 *(pPLA2-III)) & original description: none


Gene families : OG0000386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23609
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009531001 PLA IIA, PLA2A, PLP2 Lipid metabolism.lipid degradation.phospholipase... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14950.1 PLA IIB, PLP6,... phospholipase A2 (pPLA2-III) 0.03 OrthoFinder output from all 47 species
Mp5g21760.1 PLA IVA, PLP1, AtPLAIVA Patatin-like protein 1 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
Solyc04g079260.3.1 PLA IIA, PLA2A,... phospholipase A2 (pPLA2-II) 0.02 OrthoFinder output from all 47 species
Zm00001e003820_P001 PLA IIA, PLA2A,... phospholipase A2 (pPLA2-II) 0.02 OrthoFinder output from all 47 species
Zm00001e012413_P001 PLP7, PLA IIIA,... phospholipase A2 (pPLA2-III) 0.02 OrthoFinder output from all 47 species
Zm00001e018567_P002 PLA IIA, PLA2A,... Patatin-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024413_P001 PLA IVA, PLP1,... phospholipase A2 (pPLA2-II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 57 263
No external refs found!