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  5. Pnu_g23571

Pnu_g23571 (SBP1)


Aliases : SBP1

Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23571

Target Alias Description ECC score Gene Family Method Actions
Adi_g039740 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g08224 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23926 SBP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25849.t1 Aspi01Gene25849 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026248001 RING E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20197g0010 SBP1 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.04 OrthoFinder output from all 47 species
Nbi_g00907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g007120.3.1 Solyc08g007120 Probable BOI-related E3 ubiquitin-protein ligase 2... 0.05 OrthoFinder output from all 47 species
Spa_g08669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57078 SBP1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015473_P004 Zm00001e015473 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!