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Aliases : CRR2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g23561 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272900 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G22690 | No alias | CONTAINS InterPro DOMAIN/s: Protein of unknown function... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G37380 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024582 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g035455 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04109 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g19723 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g32458 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06874 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19266 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26563 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08381 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g23962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27296 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27593 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18162 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70862 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene02401.t1 | EMB2758, Aspi01Gene02401 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene11318.t2 | Aspi01Gene11318 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48128.t1 | Aspi01Gene48128 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001369 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: CDS=172-2610 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0051.g031381 | MEF19 | not classified & original description: CDS=1-1371 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07050 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34645 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g56780 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67729 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G079700.1 | DOT4, Ceric.20G079700 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G077500.1 | Ceric.22G077500 | not classified & original description: pacid=50615168... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G027600.1 | Ceric.25G027600 | not classified & original description: pacid=50593377... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G070400.1 | Ceric.25G070400 | not classified & original description: pacid=50594567... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G020400.1 | Ceric.27G020400 | not classified & original description: pacid=50605502... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G064900.1 | Ceric.29G064900 | not classified & original description: pacid=50625208... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g38425 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50292 | SLO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g14450.1 | LOC_Os04g14450 | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g40920.1 | LOC_Os10g40920 | RNA editing factor (MEF13) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04354 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05254 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18942 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g26566 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g37787 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g57437 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07745 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g14933 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28067 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_482767g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03562 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14901 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g20531 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g31656 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15296 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02438 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13036 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15855 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32537 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57991 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g58725 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31411 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32992 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g54615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009138 | No alias | component *(NRPC16/RPC34) of TFIIIe transcription factor... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023175 | No alias | not classified & original description: CDS=1-2640 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0170.g024361 | OTP84 | cyclin-dependent kinase inhibitor *(KRP/ICK) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11913 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11962 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29372 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48925 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50518 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51690 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo98551 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g006990.3.1 | Solyc07g006990 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01122 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03497 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04184 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04582 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g27180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44852 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028330_P001 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004668 | protein-arginine deiminase activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0005254 | chloride channel activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006595 | polyamine metabolic process | IEP | HCCA |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006821 | chloride transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| BP | GO:0009445 | putrescine metabolic process | IEP | HCCA |
| BP | GO:0009446 | putrescine biosynthetic process | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| No external refs found! |