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  5. Pnu_g23436

Pnu_g23436


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23436
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene11108.t1 Aspi01Gene11108 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g05808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08501 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005956 No alias not classified & original description: CDS=1-1941 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 81 121
IPR001680 WD40_repeat 3 28
IPR001680 WD40_repeat 41 72
No external refs found!