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  5. Gb_32130

Gb_32130


Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG_01_0000601 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000601_tree ,
OG_02_0000851 (LandPlants) Phylogenetic Tree(s): OG_02_0000851_tree ,
OG_03_0000882 (SeedPlants) Phylogenetic Tree(s): OG_03_0000882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32130
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.08 Archaeplastida
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 Archaeplastida
AT3G16830 TPR2 TOPLESS-related 2 0.06 Archaeplastida
GSVIVT01015571001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 Archaeplastida
GSVIVT01017343001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.07 Archaeplastida
GSVIVT01024440001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 Archaeplastida
GSVIVT01031186001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 Archaeplastida
Gb_39002 No alias transcriptional repressor (TPL). transcriptional... 0.02 Archaeplastida
LOC_Os03g14980.1 No alias transcriptional repressor (TPL). transcriptional... 0.06 Archaeplastida
MA_10430083g0010 No alias transcriptional repressor (TPL). transcriptional... 0.11 Archaeplastida
MA_10434172g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10436445g0020 No alias transcriptional repressor (TPL). transcriptional... 0.02 Archaeplastida
MA_16979g0010 No alias Protein TPR3 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
MA_16979g0020 No alias Topless-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8901047g0010 No alias Topless-related protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c15_9880V3.1 No alias TOPLESS-related 1 0.01 Archaeplastida
Pp3c9_21250V3.1 No alias TOPLESS-related 1 0.02 Archaeplastida
Smo163891 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 Archaeplastida
Solyc03g116750.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
Solyc08g076030.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.05 Archaeplastida
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.1 Archaeplastida
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.08 Archaeplastida
Zm00001e040187_P001 No alias transcriptional repressor (TPL). transcriptional... 0.05 Archaeplastida
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.08 LandPlants
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.02 LandPlants
AT1G80490 TPR1 TOPLESS-related 1 0.02 LandPlants
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 LandPlants
AT3G16830 TPR2 TOPLESS-related 2 0.04 LandPlants
GSVIVT01015571001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 LandPlants
GSVIVT01017343001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.05 LandPlants
GSVIVT01024440001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 LandPlants
GSVIVT01031186001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 LandPlants
LOC_Os03g14980.1 No alias transcriptional repressor (TPL). transcriptional... 0.04 LandPlants
MA_10430083g0010 No alias transcriptional repressor (TPL). transcriptional... 0.1 LandPlants
Pp3c15_9880V3.1 No alias TOPLESS-related 1 0.01 LandPlants
Smo163891 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 LandPlants
Solyc08g076030.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.04 LandPlants
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.09 LandPlants
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.07 LandPlants
Zm00001e040187_P001 No alias transcriptional repressor (TPL). transcriptional... 0.02 LandPlants
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.08 SeedPlants
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.02 SeedPlants
AT1G80490 TPR1 TOPLESS-related 1 0.02 SeedPlants
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 SeedPlants
AT3G16830 TPR2 TOPLESS-related 2 0.04 SeedPlants
GSVIVT01015571001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 SeedPlants
GSVIVT01017343001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.05 SeedPlants
GSVIVT01024440001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 SeedPlants
GSVIVT01031186001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 SeedPlants
LOC_Os03g14980.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 SeedPlants
MA_10430083g0010 No alias transcriptional repressor (TPL). transcriptional... 0.09 SeedPlants
Solyc08g076030.3.1 No alias transcriptional repressor (TPL). transcriptional... 0.04 SeedPlants
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.09 SeedPlants
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.06 SeedPlants
Zm00001e040187_P001 No alias transcriptional repressor (TPL). transcriptional... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 913 945
IPR001680 WD40_repeat 448 482
No external refs found!