Pnu_g23378


Description : component *(uS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000293 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23378

Target Alias Description ECC score Gene Family Method Actions
Adi_g001387 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 39 species
Adi_g002133 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 39 species
Adi_g009361 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 39 species
Adi_g029473 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g034075 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g052479 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g062458 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Adi_g079381 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Adi_g079384 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g085529 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g099663 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g104445 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Adi_g104450 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g111057 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g125100 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Aev_g02626 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Als_g19378 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Als_g48822 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 39 species
Als_g55055 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Als_g57515 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Aob_g09673 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Aob_g37226 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Aob_g38399 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Aob_g42269 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 39 species
Aop_g24821 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Aop_g66205 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Cba_g24329 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Cba_g25573 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Cba_g43360 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Cba_g60816 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Cba_g66726 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Cba_g68169 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Cba_g77297 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Cpa|evm.model.tig00000842.28 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 39 species
Cre16.g660150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 39 species
Dcu_g18504 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Dcu_g29235 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Dde_g47222 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ehy_g03042 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 39 species
Ehy_g17076 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Len_g47582 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Len_g51996 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 39 species
Len_g52282 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Len_g55165 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Lfl_g08130 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Nbi_g15323 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Nbi_g21626 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g35331 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Pnu_g22743 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g07181 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g19705 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g26908 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g38250 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g41479 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g41480 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g41481 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 39 species
Ppi_g53291 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g60053 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 39 species
Ppi_g61640 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 39 species
Sam_g05786 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Spa_g28467 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Tin_g36900 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA

No InterPro domains available for this sequence

No external refs found!