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  5. Pnu_g23326

Pnu_g23326


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g23326
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Adi_g107851 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ala_g10299 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g05215 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dac_g31557 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13224 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g11561 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Pnu_g22509 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020073 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g20455 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 105 130
IPR000571 Znf_CCCH 13 38
IPR000571 Znf_CCCH 57 83
No external refs found!