AMTR_s00046p00058640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.15

Description : Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000125 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000125_tree ,
OG_02_0000151 (LandPlants) Phylogenetic Tree(s): OG_02_0000151_tree ,
OG_03_0000175 (SeedPlants) Phylogenetic Tree(s): OG_03_0000175_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00058640
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G73760 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G37150 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G19910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G24870 No alias RING/U-box superfamily protein 0.06 Archaeplastida
GSVIVT01026184001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
LOC_Os01g49770.1 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os04g55510.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
LOC_Os05g07070.1 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_20229g0010 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.03 Archaeplastida
Smo447294 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc02g005480.4.1 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g026150.3.1 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g007140.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.04 Archaeplastida
Zm00001e010240_P002 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e013125_P002 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
Zm00001e028107_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Zm00001e032327_P003 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
AT1G73760 No alias RING/U-box superfamily protein 0.02 LandPlants
AT2G37150 No alias RING/U-box superfamily protein 0.03 LandPlants
AT5G24870 No alias RING/U-box superfamily protein 0.06 LandPlants
MA_20229g0010 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.03 LandPlants
Pp3c22_1990V3.1 No alias RING/U-box superfamily protein 0.01 LandPlants
Smo447294 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Solyc10g007140.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.04 LandPlants
Zm00001e013125_P002 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 LandPlants
Zm00001e028107_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 LandPlants
Zm00001e032327_P003 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 LandPlants
AT1G73760 No alias RING/U-box superfamily protein 0.02 SeedPlants
AT2G37150 No alias RING/U-box superfamily protein 0.03 SeedPlants
AT5G24870 No alias RING/U-box superfamily protein 0.06 SeedPlants
MA_20229g0010 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.03 SeedPlants
Solyc10g007140.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.04 SeedPlants
Zm00001e013125_P002 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!