MA_87057g0010


Description : 27.3.52 RNA.regulation of transcription.Global transcription factor group This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4 (GTE4)


Gene families : OG_01_0000231 (Gene family) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_87057g0010
Cluster HCCA cluster: Cluster_343

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.02 Gene family
GSVIVT01001835001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
GSVIVT01008492001 No alias 35.2 not assigned.unknown Encodes NPX1 (Nuclear Protein... 0.04 Gene family
GSVIVT01020670001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.06 Gene family
LOC_Os02g15220 Os02g0250300 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
LOC_Os02g38980 Os02g0601800 35.2 not assigned.unknown Encodes NPX1 (Nuclear Protein... 0.02 Gene family
LOC_Os07g32420 Os07g0507700 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
LOC_Os08g09340 Os08g0192800 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Smo83947 PACid_15417950 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Solyc07g062660.3.1 Solyc07g062660.3 27.3.52 RNA.regulation of transcription.Global... 0.04 Gene family
Solyc09g090370.3.1 Solyc09g090370.3 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Solyc10g008070.3.1 Solyc10g008070.3 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Solyc12g014170.2.1 Solyc12g014170.2 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Zm00001d004790 GRMZM2G169688 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Zm00001d008922 GRMZM2G167718 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Zm00001d053022 GRMZM2G317652 27.3.52 RNA.regulation of transcription.Global... 0.04 Gene family
Zm00001d053427 GRMZM2G004741 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001487 Bromodomain 272 353
IPR027353 NET_dom 448 510
No external refs found!