Gb_30890


Description : small subunit sigma of AP-1 trans-Golgi network cargo adaptor complex


Gene families : OG_01_0000560 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000560_tree ,
OG_02_0005346 (LandPlants) Phylogenetic Tree(s): OG_02_0005346_tree ,
OG_03_0005940 (SeedPlants) Phylogenetic Tree(s): OG_03_0005940_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30890
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00025420 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01009900001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01028912001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
LOC_Os03g57040.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 Archaeplastida
LOC_Os08g30480.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
MA_23830g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g14560.1 No alias AP-3 complex subunit sigma OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.05 Archaeplastida
Pp3c12_2376V3.1 No alias Clathrin adaptor complex small chain family protein 0.02 Archaeplastida
Pp3c26_15020V3.1 No alias associated protein 19 0.03 Archaeplastida
Pp3c9_6760V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Solyc04g081410.3.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.05 Archaeplastida
Solyc05g026130.3.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
Solyc11g005220.2.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 Archaeplastida
Zm00001e011050_P001 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Zm00001e018362_P003 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.04 Archaeplastida
AMTR_s00079p00186170 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 LandPlants
GSVIVT01013725001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 LandPlants
GSVIVT01028912001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 LandPlants
LOC_Os03g57040.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 LandPlants
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 LandPlants
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 LandPlants
Pp3c26_15020V3.1 No alias associated protein 19 0.03 LandPlants
Solyc11g005220.2.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 LandPlants
GSVIVT01028912001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 SeedPlants
LOC_Os03g57040.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 SeedPlants
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 SeedPlants
Solyc11g005220.2.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 140
No external refs found!