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  5. Gb_30839

Gb_30839


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30839
Cluster HCCA: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.03 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
AT5G43175 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
GSVIVT01031338001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo405220 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Smo413232 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc04g078790.3.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.02 LandPlants
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 LandPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Solyc02g090950.1.1 No alias transcription factor (bHLH) 0.01 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.02 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.01 SeedPlants
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 SeedPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.01 SeedPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.01 SeedPlants
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.01 SeedPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 541 581
No external refs found!