Gb_30577


Description : component UPF3 of RNA quality control Exon Junction complex


Gene families : OG_01_0002934 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002934_tree ,
OG_02_0002802 (LandPlants) Phylogenetic Tree(s): OG_02_0002802_tree ,
OG_03_0003003 (SeedPlants) Phylogenetic Tree(s): OG_03_0003003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30577
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00188270 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.04 Archaeplastida
LOC_Os04g35920.2 No alias component UPF3 of RNA quality control Exon Junction complex 0.03 Archaeplastida
MA_102917g0010 No alias component UPF3 of RNA quality control Exon Junction complex 0.03 Archaeplastida
Mp1g05590.1 No alias component UPF3 of RNA quality control Exon Junction complex 0.02 Archaeplastida
Zm00001e008047_P001 No alias component UPF3 of RNA quality control Exon Junction complex 0.03 Archaeplastida
AMTR_s00071p00188270 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.02 LandPlants
LOC_Os04g35920.2 No alias component UPF3 of RNA quality control Exon Junction complex 0.03 LandPlants
MA_102917g0010 No alias component UPF3 of RNA quality control Exon Junction complex 0.02 LandPlants
Mp1g05590.1 No alias component UPF3 of RNA quality control Exon Junction complex 0.02 LandPlants
Zm00001e008047_P001 No alias component UPF3 of RNA quality control Exon Junction complex 0.03 LandPlants
LOC_Os04g35920.2 No alias component UPF3 of RNA quality control Exon Junction complex 0.02 SeedPlants
Zm00001e008047_P001 No alias component UPF3 of RNA quality control Exon Junction complex 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005120 UPF3_dom 11 96
No external refs found!