MA_85955g0020


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor that


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_85955g0020
Cluster HCCA cluster: Cluster_422

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021553001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
GSVIVT01025691001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
GSVIVT01032251001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os04g56850 Os04g0664400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc03g031970.3.1 Solyc03g031970.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Solyc05g047460.3.1 Solyc05g047460.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc11g069500.2.1 Solyc11g069500.2 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d014690 GRMZM2G317900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d017284 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d026540 GRMZM2G086949 No description available 0.02 Gene family
Zm00001d051172 GRMZM2G081406 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 9 76
IPR010525 Auxin_resp 101 184
No external refs found!