Gb_30392


Description : chromatin remodeling factor (SMARCAL1)


Gene families : OG_01_0005923 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005923_tree ,
OG_02_0009245 (LandPlants) Phylogenetic Tree(s): OG_02_0009245_tree ,
OG_03_0010620 (SeedPlants) Phylogenetic Tree(s): OG_03_0010620_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30392
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00037960 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.04 Archaeplastida
AMTR_s00110p00037960 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 LandPlants
AMTR_s00110p00037960 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004519 endonuclease activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002711 HNH 1078 1112
IPR000330 SNF2_dom 226 454
IPR001650 Helicase_C 554 655
No external refs found!