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  5. Gb_30049

Gb_30049


Description : transcription factor (TCP)


Gene families : OG_01_0000332 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000332_tree ,
OG_02_0000167 (LandPlants) Phylogenetic Tree(s): OG_02_0000167_tree ,
OG_03_0058608 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30049
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00041830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.01 Archaeplastida
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.02 Archaeplastida
AT3G18550 BRC1, ATTCP18, TCP18 TCP family transcription factor 0.03 Archaeplastida
GSVIVT01008234001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
LOC_Os03g49880.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os07g05720.1 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os09g24480.1 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os12g42190.1 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_101752g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_12784g0010 No alias transcription factor (TCP) 0.01 Archaeplastida
MA_16704g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_3891g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_75780g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_78665g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_86651g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.05 Archaeplastida
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc02g089830.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc03g045030.2.1 No alias transcription factor (TCP) 0.01 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc06g069240.2.1 No alias transcription factor (TCP) 0.01 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc07g053410.4.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc10g082063.1.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e005407_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 LandPlants
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.02 LandPlants
AT3G18550 BRC1, ATTCP18, TCP18 TCP family transcription factor 0.02 LandPlants
GSVIVT01008234001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 LandPlants
GSVIVT01032911001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 LandPlants
LOC_Os07g05720.1 No alias transcription factor (TCP) 0.02 LandPlants
LOC_Os12g42190.1 No alias transcription factor (TCP) 0.02 LandPlants
MA_101752g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_101752g0020 No alias transcription factor (TCP) 0.02 LandPlants
MA_12784g0010 No alias transcription factor (TCP) 0.01 LandPlants
MA_15254g0010 No alias transcription factor (TCP) 0.01 LandPlants
MA_16704g0010 No alias transcription factor (TCP) 0.02 LandPlants
MA_3891g0010 No alias transcription factor (TCP) 0.03 LandPlants
MA_547683g0010 No alias transcription factor (TCP) 0.01 LandPlants
MA_61233g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_78665g0010 No alias transcription factor (TCP) 0.02 LandPlants
MA_86651g0020 No alias no hits & (original description: none) 0.02 LandPlants
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 LandPlants
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.03 LandPlants
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.02 LandPlants
Solyc02g089830.2.1 No alias transcription factor (TCP) 0.02 LandPlants
Solyc03g045030.2.1 No alias transcription factor (TCP) 0.01 LandPlants
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.02 LandPlants
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.02 LandPlants
Solyc10g082063.1.1 No alias transcription factor (TCP) 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 189 382
No external refs found!