Gb_29819


Description : LRR-domain extensin


Gene families : OG_01_0000279 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000279_tree ,
OG_02_0000206 (LandPlants) Phylogenetic Tree(s): OG_02_0000206_tree ,
OG_03_0000158 (SeedPlants) Phylogenetic Tree(s): OG_03_0000158_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29819
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.06 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 Archaeplastida
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.05 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.03 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g078560.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.03 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e015109_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e022985_P003 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 LandPlants
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 LandPlants
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 LandPlants
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 LandPlants
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 LandPlants
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 LandPlants
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 LandPlants
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 LandPlants
LOC_Os03g58110.1 No alias LRR-domain extensin 0.02 LandPlants
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.03 LandPlants
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.02 LandPlants
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 LandPlants
Smo134330 No alias Leucine-rich repeat extensin-like protein 4... 0.02 LandPlants
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 LandPlants
Solyc07g053840.1.1 No alias LRR-domain extensin 0.02 LandPlants
Zm00001e011874_P001 No alias LRR-domain extensin 0.04 LandPlants
Zm00001e025924_P001 No alias LRR-domain extensin 0.02 LandPlants
Zm00001e031241_P001 No alias LRR-domain extensin 0.02 LandPlants
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.02 SeedPlants
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.02 SeedPlants
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 SeedPlants
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.02 SeedPlants
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 SeedPlants
Zm00001e031241_P001 No alias LRR-domain extensin 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 115 147
No external refs found!