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Gb_29819


Description : LRR-domain extensin


Gene families : OG_01_0000279 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000279_tree ,
OG_02_0000206 (LandPlants) Phylogenetic Tree(s): OG_02_0000206_tree ,
OG_03_0000158 (SeedPlants) Phylogenetic Tree(s): OG_03_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29819
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.06 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 Archaeplastida
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.05 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.03 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g078560.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.03 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e015109_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e022985_P003 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.04 LandPlants
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 LandPlants
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 LandPlants
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 LandPlants
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 LandPlants
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 LandPlants
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 LandPlants
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 LandPlants
LOC_Os03g58110.1 No alias LRR-domain extensin 0.02 LandPlants
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.03 LandPlants
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.02 LandPlants
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 LandPlants
Smo134330 No alias Leucine-rich repeat extensin-like protein 4... 0.02 LandPlants
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 LandPlants
Solyc07g053840.1.1 No alias LRR-domain extensin 0.02 LandPlants
Zm00001e011874_P001 No alias LRR-domain extensin 0.04 LandPlants
Zm00001e025924_P001 No alias LRR-domain extensin 0.02 LandPlants
Zm00001e031241_P001 No alias LRR-domain extensin 0.02 LandPlants
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.02 SeedPlants
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.02 SeedPlants
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 SeedPlants
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.02 SeedPlants
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 SeedPlants
Zm00001e031241_P001 No alias LRR-domain extensin 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 115 147
No external refs found!