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  5. Pnu_g21087

Pnu_g21087


Description : not classified & original description: none


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g21087

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259710 evm_27.TU.AmTr_v1... Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G37000 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
Adi_g059907 No alias xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G107700.1 Ceric.02G107700 not classified & original description: pacid=50585308... 0.04 OrthoFinder output from all 47 species
Dde_g12595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g43160.1 LOC_Os06g43160 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g23570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021156 No alias not classified & original description: CDS=1221-3014 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024189 No alias not classified & original description: CDS=1-1338 0.03 OrthoFinder output from all 47 species
Sam_g22996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo230410 No alias Cell... 0.04 OrthoFinder output from all 47 species
Solyc06g064490.2.1 Solyc06g064490 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e013898_P002 Zm00001e013898 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 145 426
No external refs found!