AMTR_s00045p00168180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.199

Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component


Gene families : OG_01_0003320 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003320_tree ,
OG_02_0004054 (LandPlants) Phylogenetic Tree(s): OG_02_0004054_tree ,
OG_03_0004746 (SeedPlants) Phylogenetic Tree(s): OG_03_0004746_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00168180
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.21 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Cre10.g418100 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Gb_31719 No alias component alpha type-3 of 26S proteasome 0.03 Archaeplastida
Mp1g16770.1 No alias component alpha type-3 of 26S proteasome 0.05 Archaeplastida
Solyc02g081700.1.1 No alias component alpha type-3 of 26S proteasome 0.03 Archaeplastida
Gb_31719 No alias component alpha type-3 of 26S proteasome 0.03 LandPlants
Mp1g16770.1 No alias component alpha type-3 of 26S proteasome 0.05 LandPlants
Pp3c4_9140V3.1 No alias 20S proteasome alpha subunit C1 0.02 LandPlants
Solyc02g081700.1.1 No alias component alpha type-3 of 26S proteasome 0.03 LandPlants
Gb_31719 No alias component alpha type-3 of 26S proteasome 0.03 SeedPlants
Solyc02g081700.1.1 No alias component alpha type-3 of 26S proteasome 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 88 273
IPR000426 Proteasome_asu_N 63 85
No external refs found!