AMTR_s00002p00272200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.671

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.REM transcription factor


Gene families : OG_01_0000741 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000741_tree ,
OG_02_0000616 (LandPlants) Phylogenetic Tree(s): OG_02_0000616_tree ,
OG_03_0000481 (SeedPlants) Phylogenetic Tree(s): OG_03_0000481_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00272200
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT3G19184 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
MA_10433064g0010 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c22_9950V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 Archaeplastida
Zm00001e020584_P001 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c17_12880V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 32 118
IPR003340 B3_DNA-bd 386 476
No external refs found!