1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g20928

Pnu_g20928 (RR12, ARR12)


Aliases : RR12, ARR12

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20928
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00081480 ARR11,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
Aob_g01553 LUX, PCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03227 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Solyc04g008050.4.1 ARR1, RR1, Solyc04g008050 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 51 159
IPR001005 SANT/Myb 235 285
No external refs found!