Aliases : APUM12, PUM12
Description : not classified & original description: none
Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Azfi_s0040.g026500 | APUM12, PUM12 | not classified & original description: CDS=1-2874 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g33255 | APUM12, PUM12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g01979 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g21075 | PUM7, APUM7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002092 | APUM12, PUM12 | not classified & original description: CDS=226-2811 | 0.03 | OrthoFinder output from all 47 species | |
Tin_g04737 | PUM7, APUM7 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | HCCA |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | HCCA |
MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | HCCA |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0007264 | small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0007265 | Ras protein signal transduction | IEP | HCCA |
BP | GO:0007266 | Rho protein signal transduction | IEP | HCCA |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000571 | Znf_CCCH | 495 | 515 |
IPR001313 | Pumilio_RNA-bd_rpt | 643 | 677 |
IPR001313 | Pumilio_RNA-bd_rpt | 828 | 845 |
IPR001313 | Pumilio_RNA-bd_rpt | 790 | 823 |
IPR001313 | Pumilio_RNA-bd_rpt | 863 | 896 |
IPR001313 | Pumilio_RNA-bd_rpt | 904 | 926 |
IPR001313 | Pumilio_RNA-bd_rpt | 755 | 785 |
IPR001313 | Pumilio_RNA-bd_rpt | 679 | 711 |
IPR001313 | Pumilio_RNA-bd_rpt | 717 | 749 |
No external refs found! |