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  5. Pnu_g20709

Pnu_g20709 (MYB88, AtMYB88)


Aliases : MYB88, AtMYB88

Description : MYB class-R2R3 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20709

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00105590 LOF2, MYB105,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.02 OrthoFinder output from all 47 species
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014830 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.09 OrthoFinder output from all 47 species
Azfi_s0103.g044681 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g16982 AtMYB109, MYB109 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
MA_948059g0010 ATMYB3R5, MYB3R-5 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Ore_g38450 MYB1, AtMYB1 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!