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  5. Pnu_g20698

Pnu_g20698 (ATCSP2, GRP2, CSDP2, CSP2)


Aliases : ATCSP2, GRP2, CSDP2, CSP2

Description : cold-responsive mRNA chaperone *(CSD) & original description: none


Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pnu_g20698

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00167350 No alias External stimuli response.temperature.Csd... 0.03 OrthoFinder output from all 47 species
Aev_g22993 ATCSP2, GRP2, CSDP2, CSP2 cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20244.t1 ATCSP2, GRP2,... cold-responsive mRNA chaperone *(CSD) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40719.t1 GRP2B, ATGRP2B,... cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g02715 ATCSP2, GRP2, CSDP2, CSP2 cold-responsive mRNA chaperone *(CSD) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g05853 ATCSP2, GRP2, CSDP2, CSP2 cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Smo405045 ATCRE1, WOL,... External stimuli response.temperature.Csd... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 160 176
IPR001878 Znf_CCHC 199 214
IPR002059 CSP_DNA-bd 13 77
No external refs found!