AMTR_s00045p00146180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.155

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000002 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0000006 (SeedPlants) Phylogenetic Tree(s): OG_03_0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00146180
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00201260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.03 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.03 Archaeplastida
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.02 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.03 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.03 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.03 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.03 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_03400 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g43420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g33070.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10225049g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_14204g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_322432g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_80033g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp3g09350.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c12_10360V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g008010.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g079270.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007337_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010251_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e010546_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023478_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 LandPlants
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 LandPlants
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 LandPlants
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.03 LandPlants
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 LandPlants
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 LandPlants
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 LandPlants
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.02 LandPlants
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 LandPlants
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 LandPlants
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.02 LandPlants
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.02 LandPlants
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 LandPlants
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.02 LandPlants
AT5G60890 MYB34, ATMYB34, ATR1 myb domain protein 34 0.02 LandPlants
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.02 LandPlants
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
GSVIVT01018745001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os06g14670.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os12g33070.1 No alias transcription factor (MYB) 0.03 LandPlants
MA_10435612g0010 No alias transcription factor (MYB) 0.03 LandPlants
MA_173523g0010 No alias transcription factor (MYB) 0.03 LandPlants
MA_322432g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_52293g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_62361g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_80033g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_95747g0010 No alias transcription factor (MYB) 0.03 LandPlants
Mp3g05910.1 No alias transcription factor (MYB) 0.02 LandPlants
Mp3g23170.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc08g079270.3.1 No alias transcription factor (MYB) 0.04 LandPlants
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e007904_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e008489_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e010546_P001 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e013452_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e020044_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e023478_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 LandPlants
AT2G31180 ATMYB14, MYB14, MYB14AT myb domain protein 14 0.02 SeedPlants
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
GSVIVT01018745001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 SeedPlants
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.02 SeedPlants
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.02 SeedPlants
LOC_Os08g43550.1 No alias transcription factor (MYB) 0.02 SeedPlants
LOC_Os12g33070.1 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc06g071690.3.1 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.02 SeedPlants
Zm00001e010546_P001 No alias transcription factor (MYB) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!