Gb_29291


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 425.0)


Gene families : OG_01_0000390 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000390_tree ,
OG_02_0000129 (LandPlants) Phylogenetic Tree(s): OG_02_0000129_tree ,
OG_03_0000040 (SeedPlants) Phylogenetic Tree(s): OG_03_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29291
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Gb_01443 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.21 Archaeplastida
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.16 Archaeplastida
Gb_04925 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_07934 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.2 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 Archaeplastida
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.22 Archaeplastida
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.3 Archaeplastida
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_21087 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_28461 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_30626 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_33085 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.27 Archaeplastida
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.14 Archaeplastida
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_38275 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_39693 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 Archaeplastida
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.18 Archaeplastida
Gb_01443 No alias no hits & (original description: none) 0.05 LandPlants
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.23 LandPlants
Gb_03194 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 LandPlants
Gb_04925 No alias no hits & (original description: none) 0.05 LandPlants
Gb_07919 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_07934 No alias no hits & (original description: none) 0.05 LandPlants
Gb_13694 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_13767 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_14265 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 LandPlants
Gb_14957 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 LandPlants
Gb_15410 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.19 LandPlants
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 LandPlants
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.26 LandPlants
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.29 LandPlants
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 LandPlants
Gb_18982 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 LandPlants
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 LandPlants
Gb_21087 No alias no hits & (original description: none) 0.05 LandPlants
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_24217 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_26083 No alias no hits & (original description: none) 0.03 LandPlants
Gb_26797 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 LandPlants
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 LandPlants
Gb_30626 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_33085 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.26 LandPlants
Gb_34728 No alias no hits & (original description: none) 0.04 LandPlants
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 LandPlants
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 LandPlants
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 LandPlants
Gb_38275 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_39693 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 LandPlants
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.2 LandPlants
Gb_01443 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.24 SeedPlants
Gb_03194 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 SeedPlants
Gb_04925 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_06723 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.19 SeedPlants
Gb_07919 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_07934 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_10009 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.24 SeedPlants
Gb_13694 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_13767 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_14265 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 SeedPlants
Gb_14957 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 SeedPlants
Gb_15410 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.19 SeedPlants
Gb_17161 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 SeedPlants
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 SeedPlants
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.26 SeedPlants
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.29 SeedPlants
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 SeedPlants
Gb_18982 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 SeedPlants
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 SeedPlants
Gb_21087 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_24217 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_26083 No alias no hits & (original description: none) 0.03 SeedPlants
Gb_26797 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 SeedPlants
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 SeedPlants
Gb_30626 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_33085 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.27 SeedPlants
Gb_34632 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.18 SeedPlants
Gb_34728 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_34810 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 SeedPlants
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 SeedPlants
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 SeedPlants
Gb_38275 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_39693 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 SeedPlants
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.21 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 184 425
No external refs found!