Gb_29252


Description : component RPL38 of LSU proteome component


Gene families : OG_01_0004269 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004269_tree ,
OG_02_0004744 (LandPlants) Phylogenetic Tree(s): OG_02_0004744_tree ,
OG_03_0005941 (SeedPlants) Phylogenetic Tree(s): OG_03_0005941_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29252
Cluster HCCA: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AT2G43460 No alias Ribosomal L38e protein family 0.12 Archaeplastida
AT3G59540 No alias Ribosomal L38e protein family 0.1 Archaeplastida
Cpa|evm.model.tig00021719.6 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Cre07.g325746 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
GSVIVT01010854001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01019051001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
LOC_Os11g24610.1 No alias component RPL38 of LSU proteome component 0.07 Archaeplastida
MA_20588g0010 No alias component RPL38 of LSU proteome component 0.06 Archaeplastida
Mp7g14520.1 No alias component RPL38 of LSU proteome component 0.14 Archaeplastida
Pp3c10_20240V3.1 No alias Ribosomal L38e protein family 0.13 Archaeplastida
Pp3c12_17990V3.1 No alias Ribosomal L38e protein family 0.11 Archaeplastida
Pp3c3_25640V3.1 No alias Ribosomal L38e protein family 0.1 Archaeplastida
Pp3c4_11700V3.1 No alias Ribosomal L38e protein family 0.08 Archaeplastida
Smo270247 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Solyc05g055640.4.1 No alias component RPL38 of LSU proteome component 0.06 Archaeplastida
Solyc11g008510.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e003730_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
AT2G43460 No alias Ribosomal L38e protein family 0.08 LandPlants
AT3G59540 No alias Ribosomal L38e protein family 0.08 LandPlants
GSVIVT01010854001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 LandPlants
GSVIVT01019051001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 LandPlants
LOC_Os11g24610.1 No alias component RPL38 of LSU proteome component 0.07 LandPlants
MA_20588g0010 No alias component RPL38 of LSU proteome component 0.06 LandPlants
Mp7g14520.1 No alias component RPL38 of LSU proteome component 0.12 LandPlants
Pp3c10_20240V3.1 No alias Ribosomal L38e protein family 0.1 LandPlants
Pp3c12_17990V3.1 No alias Ribosomal L38e protein family 0.1 LandPlants
Pp3c3_25640V3.1 No alias Ribosomal L38e protein family 0.06 LandPlants
Pp3c4_11700V3.1 No alias Ribosomal L38e protein family 0.08 LandPlants
Smo270247 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 LandPlants
Solyc05g055640.4.1 No alias component RPL38 of LSU proteome component 0.03 LandPlants
Solyc11g008510.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e003730_P001 No alias no hits & (original description: none) 0.07 LandPlants
AT2G43460 No alias Ribosomal L38e protein family 0.08 SeedPlants
AT3G59540 No alias Ribosomal L38e protein family 0.08 SeedPlants
GSVIVT01010854001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 SeedPlants
GSVIVT01019051001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 SeedPlants
LOC_Os11g24610.1 No alias component RPL38 of LSU proteome component 0.04 SeedPlants
MA_20588g0010 No alias component RPL38 of LSU proteome component 0.05 SeedPlants
Solyc05g055640.4.1 No alias component RPL38 of LSU proteome component 0.03 SeedPlants
Zm00001e003730_P001 No alias no hits & (original description: none) 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 104 167
No external refs found!