Gb_29169


Description : exo-/endoribonuclease (RNase J)


Gene families : OG_01_0006288 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006288_tree ,
OG_02_0005831 (LandPlants) Phylogenetic Tree(s): OG_02_0005831_tree ,
OG_03_0005199 (SeedPlants) Phylogenetic Tree(s): OG_03_0005199_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29169
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.04 Archaeplastida
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.05 Archaeplastida
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.08 Archaeplastida
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.03 Archaeplastida
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.08 Archaeplastida
Pp3c20_9790V3.1 No alias RNA-metabolising metallo-beta-lactamase family protein 0.05 Archaeplastida
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.06 Archaeplastida
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.04 Archaeplastida
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.04 LandPlants
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.04 LandPlants
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.07 LandPlants
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.02 LandPlants
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.04 LandPlants
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.07 LandPlants
Pp3c20_9790V3.1 No alias RNA-metabolising metallo-beta-lactamase family protein 0.05 LandPlants
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.06 LandPlants
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.05 LandPlants
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.04 LandPlants
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.03 SeedPlants
AT5G63420 emb2746 RNA-metabolising metallo-beta-lactamase family protein 0.04 SeedPlants
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.07 SeedPlants
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.02 SeedPlants
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.05 SeedPlants
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.06 SeedPlants
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.05 SeedPlants
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011108 RMMBL 464 503
IPR001279 Metallo-B-lactamas 132 269
No external refs found!