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  5. Pnu_g20406

Pnu_g20406


Description : PHD finger transcription factor & original description: none


Gene families : OG0003668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20406
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT5G22760 No alias PHD finger family protein 0.02 OrthoFinder output from all 47 species
AT5G35210 No alias metalloendopeptidases;zinc ion binding;DNA binding 0.02 OrthoFinder output from all 47 species
Ehy_g31521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05757 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g03480.1 No alias PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Pir_g51883 No alias PHD finger transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035778_P001 Zm00001e035778 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 494 536
IPR018501 DDT_dom 305 360
No external refs found!