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  5. AMTR_s00045p00133270

AMTR_s00045p00133270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.132

No description available


Gene families : OG_01_0000125 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000125_tree ,
OG_02_0000151 (LandPlants) Phylogenetic Tree(s): OG_02_0000151_tree ,
OG_03_0000175 (SeedPlants) Phylogenetic Tree(s): OG_03_0000175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00133270
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT1G17970 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G07225 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G42940 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01022103001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01022107001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01022110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01025294001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_33701 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10431600g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_35916g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
Solyc03g026150.3.1 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g062720.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 Archaeplastida
Zm00001e000545_P002 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e036646_P001 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e038893_P003 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
AT1G73760 No alias RING/U-box superfamily protein 0.02 LandPlants
AT5G67120 No alias RING/U-box superfamily protein 0.02 LandPlants
Gb_33701 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 LandPlants
MA_35916g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 LandPlants
GSVIVT01022110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Gb_33701 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!