MA_82595g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_82595g0010
Cluster HCCA cluster: Cluster_1001

Target Alias Description ECC score Gene Family Method Actions
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Gene family
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G46790 CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Gene family
GSVIVT01000086001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01008173001 No alias No description available 0.02 Gene family
GSVIVT01009407001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01015466001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01017365001 No alias No description available 0.02 Gene family
GSVIVT01023971001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01036511001 No alias No description available 0.02 Gene family
GSVIVT01036788001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_6527g0010 No alias No description available 0.04 Gene family
Smo10002 PACid_15418807 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo100621 PACid_15401733 No description available 0.02 Gene family
Smo89230 PACid_15407693 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo96927 PACid_15411604 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo99756 PACid_15418911 No description available 0.01 Gene family
Solyc07g008480.2.1 Solyc07g008480.2 No description available 0.04 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d039873 GRMZM2G380195 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 470 594
IPR002885 Pentatricopeptide_repeat 69 94
IPR002885 Pentatricopeptide_repeat 372 396
IPR002885 Pentatricopeptide_repeat 1 24
IPR002885 Pentatricopeptide_repeat 196 242
IPR002885 Pentatricopeptide_repeat 297 344
IPR002885 Pentatricopeptide_repeat 96 142
No external refs found!